Home  |  Search  |  User Preferences  |  About the Project  |  About the Biology  |  Contact Us

AtSCE1a
(Best curated entry)

General   |   RNA/DNA   |   Citations   |   Mutants   |   XML Login
General Information  
Name: AtSCE1a
PlantsUBQ ID: 69324
Species: Arabidopsis thaliana (mouse-ear cress)
Synonyms: Locus.13152, CHR3v01212004, Model.17002, 15230881, NP_191346, At3g57870.
Keywords: arabidopsis-genome7, PUBQC:SCE, ubiquitin-conjugating enzyme, ubiquitin conjugating enzyme, sumo, UBC
Description: SUMO-conjugating enzyme 1a, AHUS5 (EMBRYO DEFECTIVE 1637).
Chr. 3. Activated SUMO is transferred from the SAE/SUMO complex to the active site cysteine of the SCE by trans-esterification. The SUMO is attached to its final target with the help of an E3-like enzyme (such as SIZ). Sequence supported by cDNA: gi:1174161, gi:14596100.
Protein  
Protein Features: Protein 201903 Feature: 203609, Method: pfscan (pftools2.3.4) 8-147 Ubiquitin-conjugating enzymes family profile. Feature: 184460, Method: hmmpfam (HMMER2.3.2) 9-153 Ubiquitin-conjugating enzyme Feature: 203567, Method: prosite_scan (November 1994) 83-98 Ubiquitin-conjugating enzymes active site.
1. Ubiquitin-conjugating enzymes family profile. (pfscan (pftools2.3.4))
2. Ubiquitin-conjugating enzyme (hmmpfam (HMMER2.3.2))
3. Ubiquitin-conjugating enzymes active site. (prosite_scan (November 1994))
Protein Sequence: 
  1 MASGIARGRL AEERKSWRKN HPHGFVAKPE TGQDGTVNLM VWHCTIPGKA GTDWEGGFFP
 61 LTMHFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE DYGWRPAITV KQILVGIQDL
121 LDTPNPADPA QTDGYHLFCQ DPVEYKKRVK LQSKQYPALV

View this sequence in FASTA format
BLAST this sequence against our PlantsUBQ databases
Length: 160 amino acids
Molecular Weight: 17988.20 Da
Gene Expression Data  
Microarray Data in Different Organs
and at Different Ages
(click on graph to view data)

Data downloaded from genevestigator 		      
Microarray Data
(Click on graph to view legend)

Images provided by John Ward at AMPL.
 Data set 1 unavailable for AT3G57870

Data set 2 unavailable for AT3G57870

Data set 3 unavailable for AT3G57870
Protein History and Links to Sources  
Main Entry: AtSCE1a ID:69324 SUMO-conjugating enzyme 1a, AHUS5 (EMBRYO DEFECTIVE 1637).
is linked to these entries:
Current Entry:
PROTEIN: AtSCE1a DNA: AtSCE1a RNA: AtSCE1a
TAIR7:At3g57870.1 TAIR7:At3g57870.1 Genbank-N:NM_115649
Superceded Entry:
PROTEIN: 15230881 DNA:  RNA: 15230881
GenBank-P:NP_191346 Genbank-N:NM_115649
Strain   
At3g57870: Order strain
External Resources   
Community  
Community Annotations: annotate Annotate this entry
Chronology  
Created: 2007-05-10
Revision: 19 June 2007 YL - Updated annotation
25 May 2007 YL - Merged 201906(AT3G57870.1)
11 January 2005 MRG - Updated Annotation
  favoriteAdd to your list of favorites

 
  Address questions or comments to CompBio@purdue.edu

© 2004-2007 Purdue University, portions © 2002-2004 Regents of Univ. of California